Publications
- A. Dauger, H. Soula, C. Audebert,
Adipocyte size distribution: mathematical model of a tissue property.
in revision
- S. Cadot, C. Audebert, C. Dion, S. Ken, L. Dupré, L. Largeaud, C. Laurent, L. Ysebaert, F. Crauste, A. Quillet-Mary,
New pharmacodynamic parameters linked with ibrutinib responses in chronic lymphocytic leukemia:
Prospective study in real-world patients and mathematical modeling.
PLoS Medicine (2024), 21 (7), pp.e1004430.
HAL
- E. Leschiera, G. Al-Hity, M. S. Flint, C. Venkataraman, T. Lorenzi, L. Almeida, C. Audebert,
An individual-based model to explore the impact of psychological stress on immune infiltration into tumour spheroids.
Physical Biology (2024), Volume 21, Number 2.
HAL
- A-S. Giacobbi, L. Meyer, M. Ribot, R. Yvinec, H. Soula, C. Audebert,
Mathematical modeling of adipocyte size distributions: identifiability and parameter estimation from rat data.
Journal of Theoretical Biology (2024), Vol 581, 111747, ISSN 0022-5193.
HAL
- L. Almeida, C. Audebert, E. Leschiera,T. Lorenzi,
Discrete and continuum models for the coevolutionary dynamics between CD8+ cytotoxic T lymphocytes and tumour cells.
Mathematical Medicine and Biology: A Journal of the IMA (2023), volume 40, issue 2, 141–174.
HAL
- L. Almeida, C. Audebert, E. Leschiera, T. Lorenzi,
A hybrid discrete-continuum modelling approach to explore the impact of T-cell infiltration on anti-tumour immune response.
Bull Math Biol (2022), 84, 141.
HAL
- E. Leschiera, T. Lorenzi, S. Shen, L. Almeida and C. Audebert,
A mathematical model to study the impact of intra-tumour heterogeneity on
anti-tumour CD8+ T cell immune response.
Journal of Theoretical Biology (2022), vol 528, 111028.
HAL
- N. Golse, F. Joly, P. Combari, M.Lewin, Q. Nicolas, C.Audebert, D. Samuel, M-A. Allard, A. Sa Cunha,
D. Castaing, D. Cherqui, R. Adam, E. Vibert and I. E.Vignon-Clementel.
Predicting the risk of post-hepatectomy portal hypertension
using a digital twin: A clinical proof of concept.
Journal of Hepatology (2021), volume 74, issue 3, 661-669.
- C. Audebert, D. Laubreton, C. Arpin, O. Gandrillon, J. Marvel*, F. Crauste*,
Modeling and Characterization of Inter-Individual Variability in CD8 T Cell Responses in Mice.
In Silico Biology (2020), 14(1-2), 13-39.
available in bioRxiv
- M. Bekheit, P. Bucur, C. Audebert, E. Miquelestorena-Standley, I. E. Vignon-Clementel, E. Vibert.
Kinetics of Hepatic Volume Evolution and Architectural
Changes after Major Resection in a Porcine Model.
Eur. Surg. Res. (2019), 60,31-44.
- C. Audebert*, G. Peeters*, P. Segers, W. Laleman, D. Monbaliu, H. Korf, J. Trebicka, I. E. Vignon-Clementel+ and C. Debbaut+.
Closed-loop lumped parameter modelling of hemodynamics during cirrhogenesis in rats.
IEEE Transactions on Biomedical Engineering (2018), 65(10),2311-2322.
HAL
- C. Audebert and I. E. Vignon-Clementel.
Model and methods to assess hepatic function from indocyanine green fluorescence dynamical measurements of liver tissue.
European Journal of Pharmaceutical Sciences (2018), 115, 304-319.
HAL
- M. Bekheit, C. Audebert, P. Bucur, H. Adriaensen, E. Bled, M. Wartenberg, I. E. Vignon-Clementel and E. Vibert.
Transit time ultrasound perivascular flow probe technology is superior to MR imaging
on hepatic blood flow measurement in a porcine model.
Hepatobiliary & Pancreatic Diseases International (2018), 17(6),538-545.
- P. Bucur, M. Bekheit, C. Audebert, A. Othman, S. Hammad, M. Sebagh, M-A. Allard,
B. Decante, A. Friebel, E. Miquelestorena-Standley, D. Drasdo, J. G. Hengstler,
I. E. Vignon-Clementel and E. Vibert.
Modulating portal hemodynamics with vascular ring
allows efficient regeneration after partial hepatectomy in a porcine model.
Annals of Surgery (2018),268(1),134-142.
HAL
- C. Audebert, M. Bekheit, P. Bucur, E. Vibert, I. E. Vignon-Clementel.
Partial hepatectomy hemodynamics changes:
Experimental data explained by closed-loop lumped modeling. Journal of Biomechanics (2017),50,202-208.
HAL
- C. Audebert, P. Bucur, M. Bekheit, E. Vibert, I. E. Vignon-Clementel, J-F. Gerbeau.
Kinetic scheme for arterial and venous blood flow,
and application to partial hepatectomy modeling. Comput. Methods Appl. Mech. Engrg. (2017), 314, 102-125.
HAL
- P. Bucur, M. Bekheit, C. Audebert, I. E. Vignon-Clementel, E. Vibert.
Simplified technique for 75% and 90% hepatic resection with
hemodynamic monitoring in large white swine model. Journal of Surgical Research (2017), 209,122-130.
HAL
Seminar and conferences
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Organization
- Workshop on mathematical models of lipid transport and storage
from November 5th to 7th, Institut Henri Poincaré, Paris, France
- Workshop on Tissue growth and movement
January 2022, Institut Henri Poincaré, Paris, France.
In the thematic trimester : Mathematical modeling of organization in living matter
- Summer School, Multi-scale modeling for pattern formation in biological systems,
July 2021, organized online with Institut Mittag-Leffler, Sweden.
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International conferences
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compsyscan22: A complex systems approach to cancer understanding ,
October 2022, Lyon, France.
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Contributed talk, European Conference on Mathematical and Theoretical Biology ,
September 2022, Heidelberg, Germany.
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Workshop on Inverse problems in biology ,
March 2022, Institut Henri Poincaré, Paris, France.
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Invited speaker, IBOMAN 2021 ,
October 2021, Paris, France.
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International Conference on Systems Biology (ICSB2018) ,
October 2018, Lyon, France.
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CEMRACS Summer School ,
July 2018, Marseille, France.
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World Congress of Biomechanics (WCB) ,
July 2018, Dublin, Ireland.
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Mathematical Biology modeling days of Besançon ,
June 2018, Besançon, France.
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International Conference on Computational Bioengineering (ICCB2017) ,
September 2017, Compiegne, France.
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Colloquium 595 Biomechanics and computer assisted surgery meets medical reality,
August 2017, Lille, France.
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Computational and mathematical Biomedical Engineering (CMBE) , April 2017, Pittsburgh, USA.
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World Congress on Computational Mechanics (WCCM) , July 2016, Seoul, Korea.
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European Congress on Computational Methods in Applied Sciences and Engineering (ECCOMAS) ,
June 2016, Crete Island, Greece.
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Computational and mathematical Biomedical Engineering (CMBE) , June 2015, Cachan, France.
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World Congress on Computational Mechanics (WCCM) ,
June 2014, Barcelona, Spain.
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Poster, 4th International Conference on Engineering Frontiers in Pediatric and Congenital Heart Disease,
Inria Paris-Rocquencourt, May 2014, Le Chesnay, France.
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Seminars and national congress
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Rencontres normandes sur les aspects théoriques et numériques des EDP, November 2024, Rouen, France.
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Journées Math Bio Santé, June 2024, Nantes, France.
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Seminar, Inria team Simbiotx, June 2024, Saclay, France.
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Seminar, Rencontres Inria-LJLL, March 2024, Paris, France.
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Seminar, Inrae MaIAGE, April 2023, Jouy-en-Josas, France.
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Workshop, 50 years of Laboratory Jacques-Louis Lions, March 2019, Roscoff, France.
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Seminar, Groupe de Travail Math-Bio, Institut Denis Poisson, Université d’Orléans-Tours, February 2019, Orléans, France.
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Seminar, Laboratoire Jacques-Louis Lions, Sorbonne Université, February 2019, Paris, France.
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Seminar, Laboratory of Computational and Quantitative Biology, Sorbonne Université, December 2018, Paris, France.
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Seminar Analyse appliquée A3 LAMFA, Université de Picardie Jules Verne, March 2018, Amiens, France.
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Seminar EDP, Modélisation et Calcul Scientifique, ICJ & UMPA, February 2018, Lyon, France.
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Invited talk, Groupe De Recherche (GDR) MECABIO, Mécanique des Matériaux et Fluides Biologiques, January 2018, Toulouse, France.
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Invited talk, Groupe De Recherche (GDR) MaMoVi, MAthématiques de la MOdélisation du VIvant, September 2017, Lyon, France.
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Congrès SMAI 2017, 8e Biennale Française des Mathématiques Appliquées et Industrielles, June 2017, Ronce-les-bains, France.
- Seminar, bioMMeda group, March 2017, Ghent University, Ghent, Belgium.
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Seminar, Laboratoire de mathématique MAP5, February 2017, Université Paris Descartes, Paris, France.
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Seminar, Journée interne du Laboratoire Jacques-Louis Lions, November 2016, Paris, France.
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Seminar, BioMécanique et BioIngénierie (BMBI), UTC, November 2016, Compiègne, France.
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Open Brain in HPB Surgery, Club Innovation ACHBT, June 2016, Carnac, France.
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Congrès National d’Analyse Numérique, CANUM, May 2016, Obernai, France.
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PhD students seminar, Laboratoire de Mathématiques de Versailles, Université Versailles St-Quentin, December 2015, Paris, France.
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Seminar, Laboratoire de Mathématiques de Besançon, Université de Franche-Comté, November 2015, Besançon, France.
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Inria-Rocquencourt Junior Seminar, October 2015, Le Chesnay, France.
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PhD students working group, Université Paris-Descarte, February 2014, Paris, France.